STRINGSTRING
ENSCING00000003327 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000003327" - Zinc finger protein 55 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000003327Zinc finger protein 55 (858 aa)    
Predicted Functional Partners:
ENSCING00000006401
Uncharacterized protein (724 aa)
     
  0.914
clp1
Uncharacterized protein ; Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (430 aa)
     
  0.900
ENSCING00000021080
Uncharacterized protein (262 aa)
     
  0.860
ENSCING00000020318
Ziinc finger protein Ci-ZF(C3H)-7 (977 aa)
     
  0.845
cpsf2
Uncharacterized protein (784 aa)
     
  0.833
ENSCING00000003483
Uncharacterized protein (511 aa)
     
  0.821
ENSCING00000002955
Uncharacterized protein (707 aa)
     
  0.744
cul4a
Uncharacterized protein (614 aa)
     
  0.744
cpsf3
Uncharacterized protein (695 aa)
     
  0.730
ENSCING00000002398
Uncharacterized protein (605 aa)
     
  0.730
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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