STRINGSTRING
ENSCING00000003434 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000003434" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000003434Uncharacterized protein ; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria (1275 aa)    
Predicted Functional Partners:
ENSCING00000009665
Uncharacterized protein (664 aa)
     
      0.846
ENSCING00000004760
Uncharacterized protein (469 aa)
     
 
  0.770
polr2b
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1183 aa)
     
      0.763
ENSCING00000021222
Uncharacterized protein (90 aa)
     
      0.728
Cin.33971
Uncharacterized protein (139 aa)
     
      0.728
ENSCING00000003750
Uncharacterized protein (309 aa)
     
      0.719
ENSCING00000017235
Uncharacterized protein (1699 aa)
     
      0.718
ENSCING00000018191
Eukaryotic translation initiation factor 3 subunit G ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. This subunit can bind 18S rRNA (272 aa)
     
  0.718
ENSCING00000009590
Uncharacterized protein (659 aa)
     
      0.685
ENSCING00000008174
S-adenosylmethionine synthase ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (400 aa)
       
      0.670
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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