STRINGSTRING
ENSCING00000003488 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000003488" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000003488Uncharacterized protein (204 aa)    
Predicted Functional Partners:
ENSCING00000008350
Uncharacterized protein (325 aa)
     
 
  0.954
Cin.27512
Uncharacterized protein (78 aa)
     
 
  0.894
ENSCING00000020815
Uncharacterized protein (347 aa)
     
 
  0.868
ENSCING00000007605
Uncharacterized protein (381 aa)
     
 
  0.868
ENSCING00000008783
Uncharacterized protein (527 aa)
     
 
  0.842
ENSCING00000024111
Uncharacterized protein (315 aa)
     
 
  0.801
ENSCING00000012574
Uncharacterized protein (171 aa)
     
 
  0.801
zf(an1)-3
Uncharacterized protein (608 aa)
     
 
  0.801
r27a
R27a protein (155 aa)
     
 
  0.699
ENSCING00000003598
Uncharacterized protein (901 aa)
     
 
  0.685
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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