STRINGSTRING
nf1 protein (Ciona intestinalis) - STRING interaction network
"nf1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nf1Uncharacterized protein (891 aa)    
Predicted Functional Partners:
ENSCING00000007423
Uncharacterized protein (630 aa)
       
 
  0.802
ENSCING00000023365
Uncharacterized protein (196 aa)
     
  0.769
ENSCING00000018975
Uncharacterized protein (758 aa)
 
 
 
    0.766
rap1b
Ras-related protein RAP-1B homologue (184 aa)
     
  0.749
ENSCING00000021946
Uncharacterized protein (199 aa)
     
  0.749
ENSCING00000023267
Uncharacterized protein (195 aa)
     
  0.749
ENSCING00000024074
Uncharacterized protein (236 aa)
     
  0.749
ENSCING00000016915
Uncharacterized protein (200 aa)
     
  0.749
ENSCING00000014922
Uncharacterized protein (207 aa)
     
  0.749
ENSCING00000014562
Uncharacterized protein (203 aa)
     
  0.749
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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