STRINGSTRING
zf(c3h)-9 protein (Ciona intestinalis) - STRING interaction network
"zf(c3h)-9" - Zinc finger protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zf(c3h)-9Zinc finger protein (880 aa)    
Predicted Functional Partners:
ENSCING00000012468
Uncharacterized protein (225 aa)
       
      0.673
ENSCING00000008989
Zinc finger protein (585 aa)
       
      0.670
ENSCING00000005614
Uncharacterized protein (451 aa)
     
      0.561
ENSCING00000014349
Uncharacterized protein (49 aa)
       
      0.561
ENSCING00000013360
Uncharacterized protein (113 aa)
       
      0.561
ENSCING00000002188
Uncharacterized protein ; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (431 aa)
       
      0.561
ENSCING00000013286
Uncharacterized protein (653 aa)
     
   
  0.557
ENSCING00000014566
Uncharacterized protein (185 aa)
     
      0.555
ENSCING00000006077
Uncharacterized protein (346 aa)
     
   
  0.550
ENSCING00000014387
Uncharacterized protein (263 aa)
           
  0.538
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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