STRINGSTRING
cicesa protein (Ciona intestinalis) - STRING interaction network
"cicesa" - CiCesA protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cicesaCiCesA protein (984 aa)    
Predicted Functional Partners:
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.571
ENSCING00000016470
Uncharacterized protein (607 aa)
     
 
  0.473
ENSCING00000006088
Uncharacterized protein (688 aa)
     
 
  0.473
cipc2
Similar to putative prohormone convertase 2 (660 aa)
     
 
  0.473
pcsk5
Uncharacterized protein (608 aa)
     
 
  0.473
ENSCING00000007376
Uncharacterized protein (643 aa)
     
   
  0.448
ENSCING00000005522
Uncharacterized protein (720 aa)
     
 
  0.443
ENSCING00000023276
Uncharacterized protein (294 aa)
   
   
  0.427
ENSCING00000007699
Uncharacterized protein (983 aa)
         
  0.406
ENSCING00000018824
Uncharacterized protein (278 aa)
     
      0.404
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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