STRINGSTRING
polybromo protein (Ciona intestinalis) - STRING interaction network
"polybromo" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
polybromoUncharacterized protein (636 aa)    
Predicted Functional Partners:
ENSCING00000013288
Uncharacterized protein (435 aa)
     
  0.940
smarcc2
Uncharacterized protein (639 aa)
     
  0.908
ENSCING00000009008
Uncharacterized protein (387 aa)
     
  0.892
actl6b
Uncharacterized protein (423 aa)
     
  0.891
ENSCING00000011332
Uncharacterized protein (428 aa)
     
  0.876
ENSCING00000007774
Uncharacterized protein (405 aa)
     
  0.773
ENSCING00000024239
Uncharacterized protein (764 aa)
     
  0.747
ENSCING00000009221
Uncharacterized protein (572 aa)
     
  0.747
ENSCING00000025101
Uncharacterized protein (374 aa)
     
  0.747
ENSCING00000006076
Uncharacterized protein (809 aa)
     
  0.747
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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