STRINGSTRING
vps52 protein (Ciona intestinalis) - STRING interaction network
"vps52" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps52Uncharacterized protein (694 aa)    
Predicted Functional Partners:
ENSCING00000004677
Uncharacterized protein (842 aa)
     
  0.989
ENSCING00000006576
Uncharacterized protein (815 aa)
     
  0.985
ENSCING00000018597
Uncharacterized protein (335 aa)
     
  0.976
ENSCING00000002960
Uncharacterized protein (209 aa)
     
  0.961
ENSCING00000022926
Uncharacterized protein (267 aa)
     
  0.951
ENSCING00000018697
Uncharacterized protein (155 aa)
       
  0.947
ENSCING00000021310
Uncharacterized protein (135 aa)
       
  0.935
ENSCING00000024218
Uncharacterized protein (159 aa)
     
  0.797
ccdc132
Uncharacterized protein (808 aa)
     
  0.797
cog3
Uncharacterized protein (835 aa)
     
  0.775
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (8%) [HD]