STRINGSTRING
Ci-CT-R protein (Ciona intestinalis) - STRING interaction network
"Ci-CT-R" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ci-CT-RUncharacterized protein (401 aa)    
Predicted Functional Partners:
ENSCING00000011666
Uncharacterized protein (461 aa)
         
0.639
ENSCING00000018199
Uncharacterized protein (837 aa)
     
 
  0.626
ENSCING00000005819
Uncharacterized protein (334 aa)
       
  0.622
ENSCING00000013986
Uncharacterized protein (333 aa)
       
  0.622
ENSCING00000006628
Uncharacterized protein (291 aa)
       
  0.605
ENSCING00000006557
Uncharacterized protein (379 aa)
         
0.594
ENSCING00000006559
Uncharacterized protein (397 aa)
         
0.594
cior2
Uncharacterized protein (223 aa)
       
  0.583
ENSCING00000014731
Uncharacterized protein (199 aa)
       
  0.583
cioR
cioR protein (527 aa)
       
  0.583
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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