STRINGSTRING
sec24c protein (Ciona intestinalis) - STRING interaction network
"sec24c" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec24cUncharacterized protein (914 aa)    
Predicted Functional Partners:
sec23a
Uncharacterized protein (772 aa)
     
0.997
sec31a
Uncharacterized protein (1205 aa)
     
  0.995
ENSCING00000002557
Uncharacterized protein (312 aa)
     
  0.989
ENSCING00000005800
Uncharacterized protein (967 aa)
     
0.953
ENSCING00000005807
Uncharacterized protein (192 aa)
     
  0.919
ENSCING00000010411
Uncharacterized protein (310 aa)
     
  0.817
ENSCING00000023521
Uncharacterized protein (102 aa)
     
  0.809
ENSCING00000009600
Uncharacterized protein (214 aa)
     
  0.803
ENSCING00000009419
Uncharacterized protein (429 aa)
     
  0.795
ENSCING00000014739
Uncharacterized protein (181 aa)
     
  0.787
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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