STRINGSTRING
raf1 protein (Ciona intestinalis) - STRING interaction network
"raf1" - Serine/threonine protein kinase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
raf1Serine/threonine protein kinase (739 aa)    
Predicted Functional Partners:
mapkk1/2
Mitogen-activated protein kinase kinase (377 aa)
     
0.997
rap1b
Ras-related protein RAP-1B homologue (184 aa)
     
  0.990
mapkk5
Uncharacterized protein (458 aa)
     
0.941
ENSCING00000023365
Uncharacterized protein (196 aa)
     
  0.892
ENSCING00000002194
Uncharacterized protein (183 aa)
       
  0.873
ENSCING00000023856
Uncharacterized protein (255 aa)
     
  0.872
ci14-3-3
14-3-3 protein (256 aa)
     
  0.872
ENSCING00000001232
Uncharacterized protein (180 aa)
     
  0.866
ENSCING00000021946
Uncharacterized protein (199 aa)
       
  0.865
ENSCING00000023267
Uncharacterized protein (195 aa)
       
  0.865
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (6%) [HD]