STRINGSTRING
ENSCING00000003788 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000003788" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000003788Uncharacterized protein (248 aa)    
Predicted Functional Partners:
ENSCING00000022762
Uncharacterized protein (288 aa)
           
  0.565
ENSCING00000009639
Uncharacterized protein (603 aa)
     
   
  0.503
ENSCING00000010918
Uncharacterized protein (364 aa)
   
   
  0.490
ENSCING00000005659
Uncharacterized protein (550 aa)
     
   
  0.486
ENSCING00000024037
Uncharacterized protein (131 aa)
     
 
  0.480
ENSCING00000020477
Uncharacterized protein (180 aa)
   
   
  0.469
ENSCING00000019124
Uncharacterized protein ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position (344 aa)
           
  0.446
ENSCING00000008795
Uncharacterized protein (303 aa)
           
  0.439
ENSCING00000002884
Uncharacterized protein (560 aa)
           
  0.434
ENSCING00000006318
Uncharacterized protein ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6/CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position (395 aa)
           
  0.418
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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