STRINGSTRING
ENSCING00000003804 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000003804" - Zinc finger protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000003804Zinc finger protein (585 aa)    
Predicted Functional Partners:
ENSCING00000018657
Uncharacterized protein (402 aa)
     
  0.958
ENSCING00000020132
Uncharacterized protein (84 aa)
     
  0.838
ENSCING00000014763
Uncharacterized protein (202 aa)
     
  0.838
ENSCING00000007307
Uncharacterized protein (590 aa)
     
  0.826
ENSCING00000008017
Uncharacterized protein (888 aa)
     
  0.818
ENSCING00000007453
Uncharacterized protein (312 aa)
     
  0.818
gbf1
Uncharacterized protein (181 aa)
     
  0.811
ENSCING00000004296
Uncharacterized protein (1533 aa)
     
  0.811
arfgap-10
Arf GTPase activating protein 10 (563 aa)
     
  0.771
ENSCING00000007985
Uncharacterized protein (704 aa)
       
  0.763
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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