STRINGSTRING
ENSCING00000003888 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000003888" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000003888Uncharacterized protein (782 aa)    
Predicted Functional Partners:
ENSCING00000004449
Uncharacterized protein (230 aa)
     
 
  0.865
cnot7/8
CNOT7/8 protein (278 aa)
       
 
  0.809
ENSCING00000007520
Uncharacterized protein (909 aa)
     
    0.651
ENSCING00000024199
Uncharacterized protein (562 aa)
     
 
  0.600
ifl2
Uncharacterized protein (384 aa)
     
 
  0.594
ENSCING00000007421
Uncharacterized protein (435 aa)
     
 
  0.546
ENSCING00000010230
Uncharacterized protein (369 aa)
     
 
  0.532
ENSCING00000016737
Uncharacterized protein (308 aa)
     
 
  0.519
ENSCING00000003877
Uncharacterized protein (365 aa)
     
 
  0.519
ENSCING00000001954
Uncharacterized protein (405 aa)
     
   
  0.511
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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