STRINGSTRING
cigq protein (Ciona intestinalis) - STRING interaction network
"cigq" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cigqUncharacterized protein (362 aa)    
Predicted Functional Partners:
ENSCING00000008028
Uncharacterized protein (221 aa)
     
  0.943
plcb4
Uncharacterized protein (826 aa)
     
  0.943
ENSCING00000003768
Uncharacterized protein (347 aa)
     
  0.901
ENSCING00000014634
Uncharacterized protein (486 aa)
     
  0.900
ENSCING00000008529
Uncharacterized protein (838 aa)
     
  0.900
ENSCING00000012491
Uncharacterized protein (613 aa)
     
  0.900
ENSCING00000004554
Uncharacterized protein (758 aa)
     
  0.900
ENSCING00000020287
Guanine nucleotide-binding protein subunit gamma ; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein- effector interaction (67 aa)
       
  0.857
ENSCING00000024372
Uncharacterized protein (450 aa)
     
  0.857
ENSCING00000022363
Uncharacterized protein (383 aa)
     
  0.823
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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