STRINGSTRING
ENSCING00000003926 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000003926" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000003926Uncharacterized protein (436 aa)    
Predicted Functional Partners:
ENSCING00000012576
Uncharacterized protein (666 aa)
     
  0.714
ENSCING00000007480
Uncharacterized protein (148 aa)
     
 
  0.675
ENSCING00000000336
Uncharacterized protein (630 aa)
     
      0.598
rpl3
Uncharacterized protein (411 aa)
     
 
  0.589
myc
Transcription factor protein (681 aa)
     
  0.582
ENSCING00000018871
Uncharacterized protein (152 aa)
     
      0.562
spt4
SPT4 protein ; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II (122 aa)
       
      0.561
ENSCING00000007478
Uncharacterized protein (823 aa)
       
      0.561
ENSCING00000005956
Uncharacterized protein (373 aa)
       
      0.552
Cin.23358
Uncharacterized protein (256 aa)
       
  0.507
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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