STRINGSTRING
ect2 protein (Ciona intestinalis) - STRING interaction network
"ect2" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ect2Uncharacterized protein (782 aa)    
Predicted Functional Partners:
ENSCING00000024069
Uncharacterized protein (90 aa)
     
  0.844
Cin.21688
Uncharacterized protein (251 aa)
     
  0.844
rhoa
RhoA protein (193 aa)
       
  0.836
ENSCING00000003537
Uncharacterized protein (824 aa)
     
  0.827
rhou
Wrch protein (259 aa)
       
  0.699
LOC445704
TC10 protein (193 aa)
       
  0.699
rcl1
Rac and Cdc42-like 1 protein (194 aa)
       
  0.698
LOC445702
Rac1 protein (192 aa)
       
  0.698
ENSCING00000000475
Uncharacterized protein (623 aa)
       
  0.694
ENSCING00000021020
Uncharacterized protein (234 aa)
     
  0.674
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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