STRINGSTRING
ENSCING00000004008 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004008" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004008Uncharacterized protein (471 aa)    
Predicted Functional Partners:
ENSCING00000007544
Uncharacterized protein (1596 aa)
   
  0.982
ENSCING00000014355
Uncharacterized protein (411 aa)
   
  0.972
Cin.27617
Uncharacterized protein (535 aa)
   
  0.884
lars2
Uncharacterized protein (882 aa)
   
  0.863
lars
Uncharacterized protein (1180 aa)
   
  0.859
ENSCING00000009130
Uncharacterized protein (772 aa)
 
  0.851
mars
Uncharacterized protein (664 aa)
   
  0.835
nars
Uncharacterized protein (559 aa)
   
   
0.827
ENSCING00000005183
Uncharacterized protein (551 aa)
   
  0.817
ENSCING00000002621
Uncharacterized protein (547 aa)
   
  0.813
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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