STRINGSTRING
ENSCING00000023290 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000023290" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000023290Uncharacterized protein (462 aa)    
Predicted Functional Partners:
impdh2
Inosine-5’-monophosphate dehydrogenase (384 aa)
       
  0.663
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.554
ENSCING00000020839
Uncharacterized protein (206 aa)
 
            0.551
ENSCING00000020122
Uncharacterized protein (393 aa)
       
      0.502
gbe1
Uncharacterized protein (693 aa)
       
      0.434
ENSCING00000018363
Uncharacterized protein (672 aa)
       
      0.434
ENSCING00000011709
Uncharacterized protein (644 aa)
       
      0.434
ENSCING00000014534
Uncharacterized protein (673 aa)
       
      0.434
ENSCING00000005707
Uncharacterized protein (679 aa)
       
      0.434
ENSCING00000000748
Uncharacterized protein (649 aa)
       
      0.434
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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