STRINGSTRING
Cin.53098 protein (Ciona intestinalis) - STRING interaction network
"Cin.53098" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.53098Uncharacterized protein (189 aa)    
Predicted Functional Partners:
Cin.31768
Uncharacterized protein (814 aa)
     
      0.671
ENSCING00000006904
DNA primase (436 aa)
       
      0.670
ENSCING00000002548
Uncharacterized protein (136 aa)
       
      0.550
ENSCING00000012483
Uncharacterized protein (162 aa)
       
      0.550
su(h)
Suppressor of hairless homolog ; Transcriptional regulator that plays a central role in Notch signaling, a signaling pathway involved in cell-cell communication that regulates a broad spectrum of cell-fate determinations. Acts as a transcriptional repressor when it is not associated with Notch proteins. When associated with some Notch protein, it acts as a transcriptional activator that activates transcription of Notch target genes (By similarity). Required for the transcriptional expression of Brachyury, suggesting that it participates in notochord differentiation (554 aa)
       
  0.529
ENSCING00000004186
Uncharacterized protein (475 aa)
       
  0.524
aldh1l2
Uncharacterized protein (921 aa)
       
      0.491
n
Notch precursor (2549 aa)
     
  0.454
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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