STRINGSTRING
ENSCING00000004080 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004080" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004080Uncharacterized protein (276 aa)    
Predicted Functional Partners:
ENSCING00000002440
Uncharacterized protein (186 aa)
   
          0.526
ENSCING00000019603
Uncharacterized protein (245 aa)
   
          0.525
ENSCING00000007812
Uncharacterized protein (338 aa)
   
          0.525
Cin.13546
Uncharacterized protein (394 aa)
   
          0.525
ENSCING00000002846
Uncharacterized protein (235 aa)
   
          0.524
klhl5
Uncharacterized protein (477 aa)
   
          0.523
ENSCING00000022948
Uncharacterized protein (124 aa)
   
          0.522
klhl18
Uncharacterized protein (577 aa)
   
          0.517
ENSCING00000018242
Uncharacterized protein (102 aa)
   
          0.515
ENSCING00000017900
Uncharacterized protein (148 aa)
   
          0.471
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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