STRINGSTRING
ENSCING00000004088 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004088" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004088Uncharacterized protein (343 aa)    
Predicted Functional Partners:
ENSCING00000009221
Uncharacterized protein (572 aa)
   
  0.760
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
 
  0.682
uhrf2
UHRF2 protein (743 aa)
   
  0.672
zf(cxxc)-5
Cytosine-specific methyltransferase (1257 aa)
           
  0.634
ENSCING00000015298
Uncharacterized protein (362 aa)
     
  0.628
Cin.52569
Histone deacetylase (404 aa)
     
  0.628
ENSCING00000002360
Histone deacetylase (430 aa)
     
  0.628
ENSCING00000009639
Uncharacterized protein (603 aa)
   
   
  0.605
ENSCING00000009208
Uncharacterized protein (1067 aa)
   
  0.600
atrx
Uncharacterized protein (1087 aa)
   
  0.600
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (7%) [HD]