STRINGSTRING
ci-arm37 protein (Ciona intestinalis) - STRING interaction network
"ci-arm37" - Radial spoke protein ARM37 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ci-arm37Radial spoke protein ARM37 (342 aa)    
Predicted Functional Partners:
sdad1
Uncharacterized protein (680 aa)
 
            0.600
zf(dhhc)-1
Zinc finger protein (355 aa)
     
 
  0.570
ENSCING00000007928
Uncharacterized protein (772 aa)
     
 
  0.504
ENSCING00000003090
Uncharacterized protein (287 aa)
     
 
  0.504
ENSCING00000002496
Uncharacterized protein (462 aa)
     
 
  0.504
ENSCING00000006895
Uncharacterized protein (861 aa)
     
   
  0.483
ENSCING00000022926
Uncharacterized protein (267 aa)
           
  0.470
ic4
DC2-related axonemal dynein intermediate chain 4 (550 aa)
     
   
  0.464
ENSCING00000009008
Uncharacterized protein (387 aa)
           
  0.439
ENSCING00000001155
Uncharacterized protein (243 aa)
           
  0.439
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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