STRINGSTRING
ENSCING00000004125 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004125" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004125Uncharacterized protein (558 aa)    
Predicted Functional Partners:
ENSCING00000019633
Uncharacterized protein (299 aa)
   
   
  0.801
ENSCING00000018970
Uncharacterized protein ; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding (466 aa)
     
   
  0.641
ENSCING00000024104
Uncharacterized protein (313 aa)
   
   
  0.580
ENSCING00000008419
Uncharacterized protein (690 aa)
           
  0.560
ENSCING00000001869
tRNA-dihydrouridine synthase ; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs (309 aa)
   
   
  0.548
ENSCING00000004235
Uncharacterized protein (732 aa)
     
      0.545
ENSCING00000001784
Uncharacterized protein (362 aa)
       
    0.545
ENSCING00000006069
Uncharacterized protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (786 aa)
     
   
  0.543
ENSCING00000022904
Uncharacterized protein (135 aa)
     
   
  0.542
ENSCING00000018498
Uncharacterized protein (178 aa)
     
   
  0.542
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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