STRINGSTRING
ENSCING00000004138 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004138" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004138Uncharacterized protein (622 aa)    
Predicted Functional Partners:
ENSCING00000002160
Uncharacterized protein (114 aa)
       
  0.974
ENSCING00000007759
Uncharacterized protein (298 aa)
     
  0.779
ENSCING00000007884
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1814 aa)
       
  0.753
LOC494392
Uncharacterized protein LOC494392 (131 aa)
     
    0.718
ENSCING00000007373
Uncharacterized protein (334 aa)
       
  0.700
ENSCING00000003348
Uncharacterized protein (447 aa)
       
  0.696
spt4
SPT4 protein ; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II (122 aa)
         
  0.645
polr2b
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1183 aa)
     
 
  0.639
ENSCING00000008843
Uncharacterized protein (376 aa)
     
  0.630
Cin.27617
Uncharacterized protein (535 aa)
       
      0.630
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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