STRINGSTRING
ddx5 protein (Ciona intestinalis) - STRING interaction network
"ddx5" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddx5Uncharacterized protein (572 aa)    
Predicted Functional Partners:
ENSCING00000001546
Uncharacterized protein (1185 aa)
   
  0.983
sdad1
Uncharacterized protein (680 aa)
     
        0.960
gtpbp4
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (639 aa)
     
 
  0.904
ENSCING00000025069
Uncharacterized protein ; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (736 aa)
     
 
  0.903
ENSCING00000013663
Uncharacterized protein (376 aa)
   
  0.901
ENSCING00000004789
Uncharacterized protein (814 aa)
   
 
0.890
ENSCING00000008548
Uncharacterized protein (682 aa)
     
 
  0.887
ENSCING00000002708
Uncharacterized protein (147 aa)
     
  0.885
ENSCING00000005185
Uncharacterized protein (516 aa)
   
 
0.881
ENSCING00000017374
Uncharacterized protein (355 aa)
   
  0.881
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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