STRINGSTRING
ENSCING00000004141 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004141" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004141Uncharacterized protein (762 aa)    
Predicted Functional Partners:
ENSCING00000012217
Uncharacterized protein (203 aa)
       
      0.672
ENSCING00000011430
Uncharacterized protein (254 aa)
       
  0.618
ENSCING00000023790
Uncharacterized protein (1081 aa)
   
   
  0.559
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.500
atp7b
Uncharacterized protein (1408 aa)
   
 
  0.468
ENSCING00000003592
Uncharacterized protein (676 aa)
     
 
  0.420
eef1a2
Elongation factor 1-alpha ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (467 aa)
           
  0.410
ENSCING00000021478
Elongation factor 1-alpha ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (460 aa)
           
  0.410
eef1a1
Elongation factor 1-alpha ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (469 aa)
           
  0.410
ENSCING00000005126
Elongation factor 1-alpha ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (464 aa)
           
  0.410
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (8%) [HD]