STRINGSTRING
farsb protein (Ciona intestinalis) - STRING interaction network
"farsb" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
farsbUncharacterized protein (598 aa)    
Predicted Functional Partners:
ENSCING00000002567
Uncharacterized protein (497 aa)
   
  0.999
ENSCING00000012827
Uncharacterized protein (287 aa)
   
  0.996
Cin.27617
Uncharacterized protein (535 aa)
   
 
  0.952
iars
Uncharacterized protein (996 aa)
   
 
  0.940
ENSCING00000007544
Uncharacterized protein (1596 aa)
   
 
  0.934
aars
Uncharacterized protein (967 aa)
   
 
  0.807
ENSCING00000009513
Lysyl-tRNA synthetase (576 aa)
   
 
  0.799
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
 
  0.786
iars2
Uncharacterized protein (953 aa)
   
 
  0.760
ENSCING00000021413
Uncharacterized protein (609 aa)
   
 
  0.757
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (6%) [HD]