STRINGSTRING
ptp protein (Ciona intestinalis) - STRING interaction network
"ptp" - Tyrosine phosphatase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpTyrosine phosphatase (987 aa)    
Predicted Functional Partners:
egfr1
Epidermal growth factor receptor precursor (1462 aa)
     
  0.671
egfr2
Uncharacterized protein (880 aa)
     
  0.671
ENSCING00000005670
Uncharacterized protein (231 aa)
       
  0.658
ENSCING00000009283
Uncharacterized protein (787 aa)
     
    0.620
ENSCING00000002655
Uncharacterized protein (445 aa)
     
  0.617
Cin.31603
Uncharacterized protein (266 aa)
     
    0.616
erk5
Mitogen-activated protein kinase (820 aa)
     
  0.613
erk1/2
Mitogen-activated protein kinase (350 aa)
     
  0.613
ENSCING00000001478
Uncharacterized protein (364 aa)
     
  0.613
erk3/4
Mitogen-activated protein kinase (906 aa)
     
  0.613
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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