STRINGSTRING
srp68 protein (Ciona intestinalis) - STRING interaction network
"srp68" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srp68Uncharacterized protein ; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (594 aa)    
Predicted Functional Partners:
ENSCING00000002417
Uncharacterized protein ; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (694 aa)
     
  0.996
ENSCING00000007380
Uncharacterized protein (501 aa)
     
  0.989
ENSCING00000005156
Uncharacterized protein (119 aa)
     
  0.988
ENSCING00000018871
Uncharacterized protein (152 aa)
         
  0.749
ENSCING00000003326
Uncharacterized protein (178 aa)
         
  0.725
ENSCING00000009395
Uncharacterized protein (268 aa)
     
 
  0.639
ENSCING00000011947
40S ribosomal protein S12 (138 aa)
         
  0.631
rpl3
Uncharacterized protein (411 aa)
     
    0.630
ENSCING00000011538
Uncharacterized protein (125 aa)
       
    0.616
ENSCING00000000891
Ribosomal protein (216 aa)
     
 
    0.614
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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