STRINGSTRING
ENSCING00000004299 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004299" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004299Uncharacterized protein (922 aa)    
Predicted Functional Partners:
ENSCING00000003687
Uncharacterized protein (1175 aa)
     
0.995
stag2
Uncharacterized protein (980 aa)
     
  0.992
ENSCING00000006404
Uncharacterized protein (376 aa)
     
  0.990
ENSCING00000006230
Uncharacterized protein (657 aa)
     
  0.972
ENSCING00000002781
Uncharacterized protein (723 aa)
     
  0.955
ENSCING00000003660
Structural maintenance of chromosomes protein (1253 aa)
     
 
0.953
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
     
 
  0.953
ENSCING00000004923
Uncharacterized protein (234 aa)
     
  0.952
ENSCING00000004221
Uncharacterized protein (1068 aa)
     
  0.947
ENSCING00000007490
Uncharacterized protein (754 aa)
     
  0.933
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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