STRINGSTRING
ENSCING00000004262 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004262" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004262Uncharacterized protein (394 aa)    
Predicted Functional Partners:
ENSCING00000012967
Uncharacterized protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (427 aa)
     
 
  0.964
gtpbp4
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (639 aa)
     
 
  0.961
nmd3
Uncharacterized protein (501 aa)
     
 
  0.961
ENSCING00000000481
Uncharacterized protein (226 aa)
   
 
  0.959
ENSCING00000016546
Uncharacterized protein (71 aa)
     
 
  0.951
ENSCING00000010738
Uncharacterized protein (538 aa)
     
 
  0.951
sdad1
Uncharacterized protein (680 aa)
     
 
  0.946
ENSCING00000006610
60S ribosome subunit biogenesis protein NIP7 homolog ; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly (180 aa)
     
 
  0.945
ENSCING00000010696
Uncharacterized protein (539 aa)
     
 
  0.944
ENSCING00000007568
Uncharacterized protein (491 aa)
     
 
  0.936
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (10%) [HD]