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zf(ubr)-2 protein (Ciona intestinalis) - STRING interaction network
"zf(ubr)-2" - Zinc finger protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zf(ubr)-2Zinc finger protein (878 aa)    
Predicted Functional Partners:
ENSCING00000001685
Uncharacterized protein (162 aa)
       
  0.846
ENSCING00000021904
Uncharacterized protein (165 aa)
           
  0.571
ENSCING00000006436
Uncharacterized protein (345 aa)
     
      0.562
ENSCING00000006501
Uncharacterized protein (778 aa)
     
  0.560
ENSCING00000007623
Uncharacterized protein (4296 aa)
     
    0.538
zf(cxxc)-1
Zinc finger protein (818 aa)
     
 
  0.525
ENSCING00000022204
Uncharacterized protein (822 aa)
     
 
  0.520
ENSCING00000017248
Uncharacterized protein (221 aa)
     
 
    0.520
r27a
R27a protein (155 aa)
       
    0.513
nedd4l
E3 ubiquitin-protein ligase (871 aa)
     
    0.508
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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