STRINGSTRING
dll-a protein (Ciona intestinalis) - STRING interaction network
"dll-a" - Distal-less in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dll-aDistal-less (453 aa)    
Predicted Functional Partners:
bmp2/4
Transforming growth factor beta superfamily signaling ligand precursor (376 aa)
     
   
  0.673
smad4
Smad4 protein (527 aa)
       
  0.574
pbx
Transcription factor protein (446 aa)
           
  0.565
bra
Transcription factor protein (439 aa)
       
 
  0.517
lhx2/9
Uncharacterized protein (171 aa)
     
 
  0.511
fkh
Transcription factor protein (633 aa)
     
 
  0.485
hox13
Homeobox transcription factor Hox13 (152 aa)
       
 
  0.466
meis
Transcription factor protein (554 aa)
     
 
  0.450
ENSCING00000019659
Uncharacterized protein (414 aa)
     
   
  0.444
tbx2/3
T-box containing transcription factor (803 aa)
     
 
  0.439
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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