STRINGSTRING
ENSCING00000004353 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004353" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004353Uncharacterized protein (385 aa)    
Predicted Functional Partners:
Cin.49685
Uncharacterized protein (265 aa)
     
  0.913
ENSCING00000022917
Uncharacterized protein (214 aa)
     
  0.909
ENSCING00000017216
Uncharacterized protein (400 aa)
     
  0.909
ENSCING00000001613
Uncharacterized protein (477 aa)
     
  0.909
ENSCING00000019579
Uncharacterized protein (328 aa)
     
  0.893
ENSCING00000021519
Uncharacterized protein (255 aa)
     
  0.893
ENSCING00000001582
Uncharacterized protein (553 aa)
     
 
  0.862
ENSCING00000021300
Uncharacterized protein (158 aa)
       
 
  0.846
ENSCING00000018610
Uncharacterized protein (147 aa)
       
 
  0.846
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
 
  0.824
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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