STRINGSTRING
calumenin protein (Ciona intestinalis) - STRING interaction network
"calumenin" - Calumenin homologue precursor in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
calumeninCalumenin homologue precursor (307 aa)    
Predicted Functional Partners:
ENSCING00000001685
Uncharacterized protein (162 aa)
           
  0.582
ENSCING00000006501
Uncharacterized protein (778 aa)
     
   
  0.581
r27a
R27a protein (155 aa)
       
 
  0.530
Cin.53224
Uncharacterized protein (133 aa)
     
   
  0.529
ENSCING00000003077
Uncharacterized protein (363 aa)
     
   
  0.529
ENSCING00000008071
Uncharacterized protein (425 aa)
     
 
  0.437
ENSCING00000003133
Uncharacterized protein (503 aa)
     
 
  0.433
ENSCING00000007292
Uncharacterized protein (722 aa)
     
 
  0.426
ENSCING00000020815
Uncharacterized protein (347 aa)
       
 
  0.426
ENSCING00000007605
Uncharacterized protein (381 aa)
       
 
  0.426
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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