STRINGSTRING
ENSCING00000004454 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004454" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004454Uncharacterized protein (441 aa)    
Predicted Functional Partners:
ENSCING00000004662
Uncharacterized protein ; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway (183 aa)
     
  0.959
ENSCING00000000288
Uncharacterized protein (804 aa)
     
  0.951
ENSCING00000012515
Uncharacterized protein (315 aa)
     
  0.949
ENSCING00000007439
Uncharacterized protein (367 aa)
     
  0.906
ENSCING00000004211
Uncharacterized protein (410 aa)
     
  0.906
rtn
Reticulon (377 aa)
       
      0.736
zf(fyve)-1
Zinc finger protein (402 aa)
     
 
  0.733
ENSCING00000023768
Uncharacterized protein (215 aa)
     
  0.675
ENSCING00000003340
Uncharacterized protein (217 aa)
     
  0.675
ENSCING00000021128
Uncharacterized protein (112 aa)
     
  0.671
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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