STRINGSTRING
Cin.27937 protein (Ciona intestinalis) - STRING interaction network
"Cin.27937" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.27937Uncharacterized protein (245 aa)    
Predicted Functional Partners:
ENSCING00000012576
Uncharacterized protein (666 aa)
   
 
  0.793
ENSCING00000007504
Uncharacterized protein (660 aa)
   
  0.740
ENSCING00000021439
Uncharacterized protein (810 aa)
   
  0.699
ENSCING00000022099
Uncharacterized protein (605 aa)
 
  0.699
dnajc10
Uncharacterized protein (817 aa)
     
  0.665
ENSCING00000019715
Uncharacterized protein (136 aa)
     
  0.662
ENSCING00000020684
Uncharacterized protein (673 aa)
     
  0.662
ENSCING00000008159
Uncharacterized protein (622 aa)
     
  0.662
ENSCING00000004600
Uncharacterized protein (663 aa)
     
  0.662
ENSCING00000020015
Uncharacterized protein (220 aa)
     
  0.662
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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