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ENSCING00000004492 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004492" - ATP-dependent Clp protease proteolytic subunit in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004492ATP-dependent Clp protease proteolytic subunit (234 aa)    
Predicted Functional Partners:
ENSCING00000005469
Uncharacterized protein (368 aa)
 
  0.987
ENSCING00000002929
Uncharacterized protein (934 aa)
         
  0.728
ENSCING00000007699
Uncharacterized protein (983 aa)
   
   
  0.686
ENSCING00000007825
Uncharacterized protein (574 aa)
 
 
  0.665
dnajc10
Uncharacterized protein (817 aa)
   
 
  0.663
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
 
  0.646
ENSCING00000019992
Uncharacterized protein (82 aa)
   
 
  0.643
ENSCING00000018613
Uncharacterized protein (80 aa)
   
 
  0.643
ENSCING00000009166
Lon protease homolog (844 aa)
   
 
  0.643
ENSCING00000000814
Uncharacterized protein (331 aa)
   
 
  0.643
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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