STRINGSTRING
ENSCING00000004580 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004580" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004580Uncharacterized protein (1243 aa)    
Predicted Functional Partners:
ENSCING00000004025
Uncharacterized protein (323 aa)
     
 
  0.766
ENSCING00000003953
Uncharacterized protein (605 aa)
     
      0.668
ENSCING00000022955
Uncharacterized protein (801 aa)
     
      0.628
upf1
Uncharacterized protein (836 aa)
     
      0.628
ENSCING00000004662
Uncharacterized protein ; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway (183 aa)
       
 
  0.598
ENSCING00000003434
Uncharacterized protein ; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria (1275 aa)
     
      0.592
ENSCING00000000288
Uncharacterized protein (804 aa)
     
      0.578
ENSCING00000002827
Uncharacterized protein (151 aa)
     
      0.566
ENSCING00000023783
Uncharacterized protein (176 aa)
       
      0.561
ENSCING00000008320
Uncharacterized protein (349 aa)
       
      0.561
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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