STRINGSTRING
stk38l protein (Ciona intestinalis) - STRING interaction network
"stk38l" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stk38lUncharacterized protein (452 aa)    
Predicted Functional Partners:
ENSCING00000003276
Uncharacterized protein (219 aa)
     
  0.985
ENSCING00000005360
Uncharacterized protein (229 aa)
     
  0.967
stk3
Uncharacterized protein (491 aa)
   
0.941
ENSCING00000018856
Uncharacterized protein (450 aa)
     
  0.933
ENSCING00000003555
Uncharacterized protein (416 aa)
     
0.931
ENSCING00000024842
Uncharacterized protein (446 aa)
     
  0.844
ENSCING00000014835
E3 ubiquitin-protein ligase (910 aa)
     
  0.844
ENSCING00000007996
E3 ubiquitin-protein ligase (752 aa)
     
  0.844
nedd4l
E3 ubiquitin-protein ligase (871 aa)
     
  0.844
ENSCING00000002155
Uncharacterized protein (215 aa)
     
  0.844
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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