STRINGSTRING
BZ2 protein (Ciona intestinalis) - STRING interaction network
"BZ2" - Zinc finger protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BZ2Zinc finger protein (C2H2)-46 (600 aa)    
Predicted Functional Partners:
coe
Transcription factor protein (582 aa)
       
      0.670
irf-like-3
Interferon regulatory factor like protein (530 aa)
       
 
  0.595
top3b
DNA topoisomerase ; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (820 aa)
       
      0.561
ENSCING00000021423
Uncharacterized protein (122 aa)
       
      0.493
ENSCING00000021369
Uncharacterized protein (124 aa)
       
      0.493
ENSCING00000008098
Uncharacterized protein (627 aa)
       
 
  0.435
pax2/5/8-b
Transcription factor protein (1284 aa)
           
  0.404
myc
Transcription factor protein (681 aa)
           
  0.400
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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