STRINGSTRING
net1a protein (Ciona intestinalis) - STRING interaction network
"net1a" - Netrin precursor in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
net1aNetrin precursor (650 aa)    
Predicted Functional Partners:
ENSCING00000019876
Uncharacterized protein (170 aa)
     
  0.971
ENSCING00000009586
Uncharacterized protein (584 aa)
     
  0.940
ENSCING00000001922
Uncharacterized protein (247 aa)
     
  0.881
ci-tlr2
Toll-like receptor 2 (947 aa)
     
 
  0.780
ENSCING00000022354
Uncharacterized protein (1503 aa)
       
  0.730
ENSCING00000005369
Uncharacterized protein (1331 aa)
     
 
  0.723
rcl1
Rac and Cdc42-like 1 protein (194 aa)
       
  0.695
LOC445702
Rac1 protein (192 aa)
       
  0.695
ENSCING00000018564
Uncharacterized protein (407 aa)
     
 
  0.679
ENSCING00000023671
Uncharacterized protein (397 aa)
     
 
  0.679
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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