STRINGSTRING
zf(an1)-3 protein (Ciona intestinalis) - STRING interaction network
"zf(an1)-3" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zf(an1)-3Uncharacterized protein (608 aa)    
Predicted Functional Partners:
ENSCING00000008842
Uncharacterized protein (506 aa)
       
  0.969
ENSCING00000005199
Uncharacterized protein (266 aa)
     
  0.966
Cin.18922
40S ribosomal protein S6 (248 aa)
     
  0.965
ENSCING00000007592
Uncharacterized protein (80 aa)
     
  0.954
ENSCING00000011298
Uncharacterized protein (102 aa)
     
  0.954
ENSCING00000012576
Uncharacterized protein (666 aa)
     
  0.949
ENSCING00000001970
Uncharacterized protein (195 aa)
     
  0.946
ENSCING00000002448
Uncharacterized protein (204 aa)
     
  0.944
r27a
R27a protein (155 aa)
     
  0.941
ENSCING00000021248
Uncharacterized protein (191 aa)
     
  0.940
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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