STRINGSTRING
creb/atf-c protein (Ciona intestinalis) - STRING interaction network
"creb/atf-c" - Transcription factor Ci-CREB/ATF-c in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
creb/atf-cTranscription factor Ci-CREB/ATF-c (298 aa)    
Predicted Functional Partners:
creb/atf-b
Transcription factor protein (542 aa)
       
  0.848
creb/atf-a
Transcription factor protein (649 aa)
       
  0.833
ENSCING00000008043
Uncharacterized protein (512 aa)
     
  0.814
ENSCING00000004898
Uncharacterized protein (335 aa)
       
  0.782
ENSCING00000008616
Uncharacterized protein (149 aa)
       
  0.781
cam
Calmodulin ; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases (149 aa)
       
  0.781
camk2d
Uncharacterized protein (477 aa)
       
  0.779
rps6ka5
Uncharacterized protein (813 aa)
     
  0.759
rps6ka3
Ribosomal protein S6 kinase (730 aa)
     
  0.758
ENSCING00000006522
Uncharacterized protein (367 aa)
     
  0.754
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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