STRINGSTRING
ENSCING00000004777 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004777" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004777Uncharacterized protein (176 aa)    
Predicted Functional Partners:
ENSCING00000002729
Uncharacterized protein (579 aa)
     
 
  0.901
ENSCING00000002364
Uncharacterized protein (504 aa)
     
  0.866
ENSCING00000003181
Uncharacterized protein (1061 aa)
     
 
  0.806
ENSCING00000019127
KRR1 small subunit processome component ; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (358 aa)
   
  0.804
ENSCING00000009577
Uncharacterized protein (233 aa)
   
  0.767
ENSCING00000004801
Uncharacterized protein (657 aa)
     
        0.766
ENSCING00000023441
Uncharacterized protein (397 aa)
     
  0.738
ENSCING00000021175
Uncharacterized protein ; Involved in nucleolar processing of pre-18S ribosomal RNA (233 aa)
     
 
    0.723
ENSCING00000020812
Uncharacterized protein (866 aa)
     
 
    0.717
ENSCING00000001646
Uncharacterized protein (436 aa)
     
  0.712
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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