STRINGSTRING
Cin.28535 protein (Ciona intestinalis) - STRING interaction network
"Cin.28535" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.28535Uncharacterized protein (419 aa)    
Predicted Functional Partners:
pf-rib
Protofilament ribbon protein (379 aa)
     
   
  0.565
ciaxp66.0
Axonemal p66.0 (575 aa)
     
   
  0.520
ic5
DC2-related axonemal dynein intermediate chain 5 (548 aa)
     
   
  0.520
ENSCING00000005745
Uncharacterized protein (362 aa)
           
  0.519
ENSCING00000002033
Uncharacterized protein (552 aa)
     
   
  0.513
tekt3
Uncharacterized protein (494 aa)
     
   
  0.456
ENSCING00000005883
Uncharacterized protein (411 aa)
           
  0.443
ENSCING00000004071
Uncharacterized protein (652 aa)
           
  0.439
ENSCING00000022854
Uncharacterized protein (281 aa)
     
   
  0.402
ENSCING00000022550
Uncharacterized protein (514 aa)
     
   
  0.402
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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