STRINGSTRING
ENSCING00000004955 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004955" - Cin-mir-78 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004955Cin-mir-78 (156 aa)    
Predicted Functional Partners:
ENSCING00000006084
Uncharacterized protein (725 aa)
   
 
  0.750
ENSCING00000002987
Uncharacterized protein (731 aa)
   
 
  0.750
ENSCING00000002850
Uncharacterized protein (2241 aa)
         
  0.638
ENSCING00000004079
Uncharacterized protein (330 aa)
     
   
  0.582
ENSCING00000000732
Uncharacterized protein (84 aa)
           
  0.566
Cin.23890
Uncharacterized protein (483 aa)
     
  0.542
ENSCING00000009379
Uncharacterized protein (473 aa)
     
  0.542
dnajc10
Uncharacterized protein (817 aa)
     
   
  0.529
ENSCING00000007693
Uncharacterized protein (536 aa)
   
   
  0.487
ENSCING00000005921
Uncharacterized protein (999 aa)
     
   
  0.472
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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