STRINGSTRING
ENSCING00000004976 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004976" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004976Uncharacterized protein (175 aa)    
Predicted Functional Partners:
ENSCING00000021673
Uncharacterized protein (212 aa)
 
            0.684
gtpbp4
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (639 aa)
     
      0.537
ENSCING00000025069
Uncharacterized protein ; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (736 aa)
       
      0.497
srp68
Uncharacterized protein ; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (594 aa)
       
      0.442
ENSCING00000004789
Uncharacterized protein (814 aa)
       
      0.412
ENSCING00000002417
Uncharacterized protein ; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (694 aa)
       
      0.412
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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