STRINGSTRING
rrm2 protein (Ciona intestinalis) - STRING interaction network
"rrm2" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrm2Uncharacterized protein (367 aa)    
Predicted Functional Partners:
ENSCING00000000347
Uncharacterized protein (193 aa)
 
  0.999
ENSCING00000014118
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (262 aa)
     
 
  0.976
ENSCING00000005978
Uncharacterized protein (180 aa)
     
 
  0.974
ENSCING00000006693
Uncharacterized protein (292 aa)
     
 
  0.974
ENSCING00000003363
Uncharacterized protein (740 aa)
     
   
  0.962
akd1
Uncharacterized protein (1861 aa)
     
 
  0.936
ENSCING00000012690
Uncharacterized protein (420 aa)
   
  0.935
ENSCING00000011971
Uncharacterized protein (209 aa)
   
  0.935
Cin.33176
Uncharacterized protein ; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors (206 aa)
     
 
  0.934
ENSCING00000004142
Uncharacterized protein ; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors (212 aa)
     
 
  0.934
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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